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Welcome to WikiGoodlett! Welcome to the Goodlett Laboratory Wiki, not wookie which is a BIG hairy star wars character. If you know what you are doing, then feel free to create a user account and start editing our standard protocols and cluster how to's.
Contents |
[edit] Notices and news
- SEQUEST with OUT format is the latest version (2008-10-06)
- SEQUEST with SQT format. (2008-10-02)
- The MS Tracker has moved and is accessible without the SSH tunnel. Access is restricted from UW. A link to the MS tracker is provided below under resources. (2007-09-07).
- New SEQUEST parameter file for non-pvm sequest is on. (2008-09-16)
- New SEQUEST parameter file is on. (2007-09-06)
- Data Archive instruction(2007-10-10)
[edit] Resources
- Goodlett Laboratory Protocols
- MS tracker MS tracker
[edit] Bioinformatics Pages
- Goodlett Cluster Users Google Group
- Data conversion
- SEQUEST Parameters description
- How to Restart Phenyx
- How to run searches on the SEQUEST Cluster
- How to use the Goodlett laboratory public FTP site
- How to use the SEQUEST Cluster
- How to use the Apollo cluster Condor Queue
- How to use the tpp cluster
- Tips for installing the TPP on Linux
- Installing FASTA Databases in Phenyx
- How to add a new user on the SEQUEST Cluster
- How to run Phenyx searches and POPITAM on Goodlett phenyx server
- How to run Soyoung's Spectral Counting
- How to run Inspect searches
- How to run Corra and how to restart tomcat
- Command line tools
- TEST
[edit] Useful web-link
- Mass Spectrometry Glossary of Terms-[1]
[edit] About this wiki
This page is Restricted to Goodlett Laboratory members.
Consult the User's Guide for information on using the wiki software. Also, this example page shows a variety of formating examples.
